Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB22022.1PFAM: NADH:flavin oxidoreductase / NADH oxidase family. (426 aa)    
Predicted Functional Partners:
AGB22021.1
Hypothetical protein.
       0.773
AGB22023.1
PFAM: Bacterial regulatory proteins, tetR family.
  
  
 0.597
AGB25681.1
PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
  
 
 0.514
AGB26057.1
CarD-like transcriptional regulator; PFAM: CarD-like/TRCF domain; manually curated.
  
    0.505
AGB22020.1
PFAM: Bacterial regulatory proteins, tetR family.
  
  
 0.492
AGB25343.1
Flavodoxin reductase family protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; MOSC domain; Oxidoreductase NAD-binding domain; 3-alpha domain.
  
 
 0.480
AGB21714.1
Flavodoxin reductase family protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain.
  
 
 0.475
AGB21816.1
Flavodoxin reductase family protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain.
  
 
 0.475
AGB21886.1
2-polyprenylphenol hydroxylase-like oxidoreductase; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain.
  
 
 0.475
AGB24409.1
Ferredoxin; PFAM: 2Fe-2S iron-sulfur cluster binding domain.
  
 
 0.475
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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