Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB22058.1Hypothetical protein. (156 aa)    
Predicted Functional Partners:
AGB22059.1
Tellurite resistance protein-like permease; PFAM: C4-dicarboxylate transporter/malic acid transport protein.
       0.714
AGB23217.1
Hypothetical protein.
  
     0.638
AGB23798.1
Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily.
 
 
 0.620
AGB22057.1
Putative transcriptional regulator; PFAM: Helix-turn-helix.
 
   
 0.583
AGB21631.1
Hypothetical protein.
  
     0.511
AGB25343.1
Flavodoxin reductase family protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; MOSC domain; Oxidoreductase NAD-binding domain; 3-alpha domain.
 
   
 0.499
AGB24745.1
PFAM: Polyketide cyclase / dehydrase and lipid transport.
 
     0.487
AGB22060.1
Hypothetical protein.
       0.472
AGB23846.1
PFAM: WD40-like Beta Propeller Repeat; manually curated.
  
     0.430
AGB22907.1
Hypothetical protein.
  
     0.424
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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