Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB22096.1Hypothetical protein. (159 aa)    
Predicted Functional Partners:
AGB22095.1
Hypothetical protein.
 
     0.953
AGB26532.1
PFAM: Response regulator receiver domain; Stage II sporulation protein E (SpoIIE).
  
     0.603
AGB26531.1
Bacteriophytochrome (light-regulated signal transduction histidine kinase); PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; CHASE3 domain.
  
     0.541
AGB22091.1
PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1; TIGRFAM: PTS system, glucose subfamily, IIA component; manually curated; TC 4.A.1.1.5.
       0.517
nagB
Glucosamine-6-phosphate isomerase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily.
       0.517
AGB22093.1
PFAM: Amidohydrolase family; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase.
       0.517
AGB22094.1
Putative intracellular protease/amidase; PFAM: DJ-1/PfpI family.
       0.517
AGB25506.1
STAS domain-containing protein; PFAM: STAS domain.
  
     0.516
AGB26599.1
PFAM: Domain of unknown function (DUF1931).
  
     0.508
AGB26529.1
Anti-sigma regulatory factor (Ser/Thr protein kinase); Manually curated.
  
     0.455
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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