Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB22188.1Virulence factor Mce family protein; PFAM: Protein of unknown function (DUF3407); mce related protein; TIGRFAM: virulence factor Mce family protein. (377 aa)    
Predicted Functional Partners:
AGB22182.1
ABC-type transport system involved in resistance to organic solvents, permease component; PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein.
 
 0.977
AGB22183.1
ABC-type transport system involved in resistance to organic solvents, permease component; PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein.
 
 0.977
AGB22187.1
PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein.
 
 
 0.968
AGB22184.1
Virulence factor Mce family protein; PFAM: Protein of unknown function (DUF3407); mce related protein; TIGRFAM: virulence factor Mce family protein.
 
 
 0.967
AGB22189.1
PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein.
 
  
 0.959
AGB20553.1
PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein.
 
 
 0.951
AGB20546.1
ABC-type transport system involved in resistance to organic solvents, permease component; PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein.
 
 0.947
AGB20550.1
PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein.
 
 
 0.934
AGB22186.1
PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein.
 
 
0.921
AGB21383.1
ABC-type transport system involved in resistance to organic solvents, ATPase component; PFAM: ABC transporter.
 
 0.915
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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