Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB22499.1Putative TIM-barrel fold metal-dependent hydrolase; PFAM: Amidohydrolase. (430 aa)    
Predicted Functional Partners:
AGB24831.1
Hypothetical protein.
 
     0.764
AGB25573.1
Gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE-like region.
 
    0.751
AGB24719.1
Hypothetical protein.
 
     0.731
AGB20615.1
Putative TIM-barrel fold metal-dependent hydrolase; PFAM: Amidohydrolase family.
 
     0.694
AGB24718.1
acetyl-CoA acetyltransferase; PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N); DUF35 OB-fold domain.
  
   
 0.681
AGB25566.1
PFAM: Acyl-CoA dehydrogenase, C-terminal domain.
 
  
 0.655
AGB25571.1
Rieske (2Fe-2S) domain-containing protein; PFAM: Rieske [2Fe-2S] domain.
  
   
 0.649
AGB23482.1
Putative TIM-barrel fold metal-dependent hydrolase; PFAM: Amidohydrolase.
 
     0.638
AGB22481.1
Putative nucleic-acid-binding protein containing a Zn-ribbon; PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N); DUF35 OB-fold domain.
 
     0.637
AGB24684.1
Putative nucleic-acid-binding protein containing a Zn-ribbon; PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N); DUF35 OB-fold domain.
 
     0.635
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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