Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB22520.1PFAM: Bacterial regulatory proteins, tetR family. (184 aa)    
Predicted Functional Partners:
AGB22521.1
Cation/cationic drug transporter; PFAM: Small Multidrug Resistance protein.
 
   
 0.855
AGB21934.1
PFAM: Bacterial regulatory proteins, tetR family.
  
    0.736
AGB22508.1
Putative transcriptional regulator; PFAM: HxlR-like helix-turn-helix.
   
    0.691
cobB-3
NAD-dependent protein deacetylase, SIR2 family; PFAM: Sir2 family; Belongs to the sirtuin family. Class III subfamily.
   
    0.688
AGB23701.1
PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
   
    0.687
AGB21416.1
PFAM: Bacterial regulatory proteins, tetR family; TIGRFAM: mycofactocin system transcriptional regulator.
   
    0.682
AGB21392.1
Phenylacetic acid-responsive transcriptional repressor; PFAM: PaaX-like protein C-terminal domain; PaaX-like protein.
   
    0.676
AGB26369.1
PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain.
   
    0.644
AGB22100.1
PFAM: Bacterial regulatory proteins, tetR family.
  
    0.620
AGB21465.1
Putative ATPase; PFAM: Adenylate and Guanylate cyclase catalytic domain; Bacterial regulatory proteins, luxR family.
  
    0.609
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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