| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| atpH | nusA | Mycsm_04715 | Mycsm_02478 | ATP synthase, F0 subunit b/ATP synthase, F1 delta subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction; Belongs to the ATPase delta chain family. | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | 0.889 |
| atpH | rimM | Mycsm_04715 | Mycsm_02308 | ATP synthase, F0 subunit b/ATP synthase, F1 delta subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction; Belongs to the ATPase delta chain family. | 16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. | 0.962 |
| atpH | rplS | Mycsm_04715 | Mycsm_02311 | ATP synthase, F0 subunit b/ATP synthase, F1 delta subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction; Belongs to the ATPase delta chain family. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.965 |
| atpH | rpoA | Mycsm_04715 | Mycsm_01079 | ATP synthase, F0 subunit b/ATP synthase, F1 delta subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction; Belongs to the ATPase delta chain family. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.978 |
| atpH | rpsB | Mycsm_04715 | Mycsm_02359 | ATP synthase, F0 subunit b/ATP synthase, F1 delta subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction; Belongs to the ATPase delta chain family. | PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; Belongs to the universal ribosomal protein uS2 family. | 0.966 |
| atpH | rpsC | Mycsm_04715 | Mycsm_01011 | ATP synthase, F0 subunit b/ATP synthase, F1 delta subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction; Belongs to the ATPase delta chain family. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.968 |
| atpH | rpsD | Mycsm_04715 | Mycsm_01078 | ATP synthase, F0 subunit b/ATP synthase, F1 delta subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction; Belongs to the ATPase delta chain family. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.971 |
| atpH | rpsG | Mycsm_04715 | Mycsm_00974 | ATP synthase, F0 subunit b/ATP synthase, F1 delta subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction; Belongs to the ATPase delta chain family. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.957 |
| atpH | rpsP | Mycsm_04715 | Mycsm_02306 | ATP synthase, F0 subunit b/ATP synthase, F1 delta subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction; Belongs to the ATPase delta chain family. | PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.965 |
| atpH | trmD | Mycsm_04715 | Mycsm_02309 | ATP synthase, F0 subunit b/ATP synthase, F1 delta subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction; Belongs to the ATPase delta chain family. | tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.961 |
| nusA | atpH | Mycsm_02478 | Mycsm_04715 | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | ATP synthase, F0 subunit b/ATP synthase, F1 delta subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction; Belongs to the ATPase delta chain family. | 0.889 |
| nusA | rimM | Mycsm_02478 | Mycsm_02308 | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | 16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. | 0.891 |
| nusA | rplS | Mycsm_02478 | Mycsm_02311 | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.805 |
| nusA | rpoA | Mycsm_02478 | Mycsm_01079 | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.982 |
| nusA | rpsB | Mycsm_02478 | Mycsm_02359 | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; Belongs to the universal ribosomal protein uS2 family. | 0.945 |
| nusA | rpsC | Mycsm_02478 | Mycsm_01011 | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.952 |
| nusA | rpsD | Mycsm_02478 | Mycsm_01078 | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.927 |
| nusA | rpsG | Mycsm_02478 | Mycsm_00974 | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.975 |
| nusA | rpsP | Mycsm_02478 | Mycsm_02306 | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.797 |
| nusA | trmD | Mycsm_02478 | Mycsm_02309 | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.942 |
