Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGB21895.1 | AGB22720.1 | Mycsm_01487 | Mycsm_02380 | PFAM: Bacterial regulatory proteins, tetR family. | PFAM: Bacterial regulatory proteins, tetR family. | 0.695 |
AGB21895.1 | AGB22928.1 | Mycsm_01487 | Mycsm_02593 | PFAM: Bacterial regulatory proteins, tetR family. | Hypothetical protein. | 0.564 |
AGB21895.1 | AGB24678.1 | Mycsm_01487 | Mycsm_04439 | PFAM: Bacterial regulatory proteins, tetR family. | Putative TIM-barrel fold metal-dependent hydrolase; PFAM: Amidohydrolase. | 0.474 |
AGB21895.1 | AGB24712.1 | Mycsm_01487 | Mycsm_04475 | PFAM: Bacterial regulatory proteins, tetR family. | Putative TIM-barrel fold metal-dependent hydrolase; PFAM: Amidohydrolase. | 0.644 |
AGB21895.1 | AGB24714.1 | Mycsm_01487 | Mycsm_04477 | PFAM: Bacterial regulatory proteins, tetR family. | Hypothetical protein. | 0.762 |
AGB21895.1 | AGB24717.1 | Mycsm_01487 | Mycsm_04480 | PFAM: Bacterial regulatory proteins, tetR family. | Ferredoxin. | 0.593 |
AGB22720.1 | AGB21895.1 | Mycsm_02380 | Mycsm_01487 | PFAM: Bacterial regulatory proteins, tetR family. | PFAM: Bacterial regulatory proteins, tetR family. | 0.695 |
AGB22720.1 | AGB22753.1 | Mycsm_02380 | Mycsm_02416 | PFAM: Bacterial regulatory proteins, tetR family. | PFAM: Domain of unknown function (DUF385); TIGRFAM: deazaflavin-dependent nitroreductase family protein. | 0.599 |
AGB22720.1 | AGB22928.1 | Mycsm_02380 | Mycsm_02593 | PFAM: Bacterial regulatory proteins, tetR family. | Hypothetical protein. | 0.734 |
AGB22720.1 | AGB23462.1 | Mycsm_02380 | Mycsm_03153 | PFAM: Bacterial regulatory proteins, tetR family. | PFAM: Bacterial regulatory proteins, tetR family. | 0.595 |
AGB22720.1 | AGB23643.1 | Mycsm_02380 | Mycsm_03340 | PFAM: Bacterial regulatory proteins, tetR family. | Hypothetical protein; PFAM: Carboxymuconolactone decarboxylase family. | 0.598 |
AGB22720.1 | AGB24678.1 | Mycsm_02380 | Mycsm_04439 | PFAM: Bacterial regulatory proteins, tetR family. | Putative TIM-barrel fold metal-dependent hydrolase; PFAM: Amidohydrolase. | 0.630 |
AGB22720.1 | AGB24687.1 | Mycsm_02380 | Mycsm_04449 | PFAM: Bacterial regulatory proteins, tetR family. | PFAM: Bacterial regulatory proteins, tetR family. | 0.687 |
AGB22720.1 | AGB24712.1 | Mycsm_02380 | Mycsm_04475 | PFAM: Bacterial regulatory proteins, tetR family. | Putative TIM-barrel fold metal-dependent hydrolase; PFAM: Amidohydrolase. | 0.628 |
AGB22720.1 | AGB24714.1 | Mycsm_02380 | Mycsm_04477 | PFAM: Bacterial regulatory proteins, tetR family. | Hypothetical protein. | 0.666 |
AGB22720.1 | AGB24717.1 | Mycsm_02380 | Mycsm_04480 | PFAM: Bacterial regulatory proteins, tetR family. | Ferredoxin. | 0.581 |
AGB22753.1 | AGB22720.1 | Mycsm_02416 | Mycsm_02380 | PFAM: Domain of unknown function (DUF385); TIGRFAM: deazaflavin-dependent nitroreductase family protein. | PFAM: Bacterial regulatory proteins, tetR family. | 0.599 |
AGB22753.1 | AGB24687.1 | Mycsm_02416 | Mycsm_04449 | PFAM: Domain of unknown function (DUF385); TIGRFAM: deazaflavin-dependent nitroreductase family protein. | PFAM: Bacterial regulatory proteins, tetR family. | 0.413 |
AGB22928.1 | AGB21895.1 | Mycsm_02593 | Mycsm_01487 | Hypothetical protein. | PFAM: Bacterial regulatory proteins, tetR family. | 0.564 |
AGB22928.1 | AGB22720.1 | Mycsm_02593 | Mycsm_02380 | Hypothetical protein. | PFAM: Bacterial regulatory proteins, tetR family. | 0.734 |
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