STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB22742.1PFAM: Bacterial regulatory proteins, tetR family. (219 aa)    
Predicted Functional Partners:
AGB22741.1
PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
 
     0.946
AGB22738.1
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase; PFAM: FAD binding domain.
 
   
 0.936
AGB22740.1
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase; PFAM: Fumarylacetoacetate (FAA) hydrolase family.
 
     0.934
AGB22739.1
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: AMP-binding enzyme.
 
   
 0.693
AGB22737.1
PFAM: Cytochrome P450.
 
   
 0.638
AGB20771.1
PFAM: P-aminobenzoate N-oxygenase AurF.
  
     0.515
AGB20766.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
 
   
 0.481
AGB22736.1
Hypothetical protein.
       0.474
AGB21575.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
 
   
 0.445
AGB24218.1
PFAM: Bacterial regulatory proteins, tetR family.
 
     0.443
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.