Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AGB22778.1PFAM: Amino acid permease. (527 aa)    
Predicted Functional Partners:
AGB22779.1
Hypothetical protein.
       0.773
AGB22794.1
Putative choline kinase involved in LPS biosynthesis; PFAM: Choline/ethanolamine kinase.
 
 
 0.726
AGB22776.1
GNAT-family acetyltransferase TIGR03103; PFAM: RimK-like ATP-grasp domain; Acetyltransferase (GNAT) family; TIGRFAM: GNAT-family acetyltransferase TIGR03103.
  
  
 0.675
AGB22788.1
Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short chain dehydrogenase.
 
 
 0.644
AGB22777.1
Asparagine synthase, glutamine-hydrolyzing; PFAM: Asparagine synthase; TIGRFAM: asparagine synthase family amidotransferase; asparagine synthase (glutamine-hydrolyzing).
     
 0.637
AGB24522.1
Purine-cytosine permease-like transporter; PFAM: Permease for cytosine/purines, uracil, thiamine, allantoin; TIGRFAM: NCS1 nucleoside transporter family; Belongs to the purine-cytosine permease (2.A.39) family.
  
  
 0.627
AGB23617.1
Glycosidase; PFAM: Alpha amylase, catalytic domain.
  
 0.576
AGB24534.1
Glycosidase; PFAM: Alpha amylase, catalytic domain.
  
 0.576
glgE
Glycosidase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB; Belongs to the glycosyl hydrolase 13 family. GlgE subfamily.
  
 0.576
AGB26463.1
Trehalose synthase; PFAM: Alpha amylase, catalytic domain; TIGRFAM: trehalose synthase.
  
 0.576
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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