Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB22779.1Hypothetical protein. (72 aa)    
Predicted Functional Partners:
AGB22778.1
PFAM: Amino acid permease.
       0.773
AGB22776.1
GNAT-family acetyltransferase TIGR03103; PFAM: RimK-like ATP-grasp domain; Acetyltransferase (GNAT) family; TIGRFAM: GNAT-family acetyltransferase TIGR03103.
       0.620
AGB22777.1
Asparagine synthase, glutamine-hydrolyzing; PFAM: Asparagine synthase; TIGRFAM: asparagine synthase family amidotransferase; asparagine synthase (glutamine-hydrolyzing).
       0.620
AGB22780.1
Ethanolamine:proton symporter, EAT family; PFAM: Amino acid permease; TIGRFAM: ethanolamine permease; TC 2.A.3.5.1.
       0.560
AGB22781.1
PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; Belongs to the FGGY kinase family.
       0.536
AGB22782.1
Glycerol dehydrogenase-like oxidoreductase; PFAM: 3-dehydroquinate synthase.
       0.536
AGB22783.1
1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase.
       0.525
AGB22784.1
PFAM: Bacterial regulatory proteins, gntR family; UTRA domain.
       0.515
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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