STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB22857.1PFAM: Protein of unknown function (DUF2834). (149 aa)    
Predicted Functional Partners:
AGB24260.1
PFAM: SAM dependent carboxyl methyltransferase.
  
     0.716
AGB25726.1
Hypothetical protein; PFAM: Polyketide cyclase / dehydrase and lipid transport.
  
     0.661
AGB22855.1
Oxidoreductase, SDR family; PFAM: short chain dehydrogenase; TIGRFAM: oxidoreductase, SDR family.
  
  
 0.632
AGB21563.1
Hypothetical protein.
 
     0.607
AGB22856.1
Hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase.
       0.598
AGB22854.1
Methyltransferase, putative, TIGR00027 family; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
       0.595
AGB24404.1
Hypothetical protein.
 
     0.583
AGB25833.1
Tellurite resistance protein-like permease; PFAM: C4-dicarboxylate transporter/malic acid transport protein.
  
    0.581
AGB21965.1
Hypothetical protein.
 
  
 0.563
AGB22858.1
DNA segregation ATPase, FtsK/SpoIIIE family; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family.
       0.563
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.