Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB23099.1Hypothetical protein; PFAM: Bacterial domain of unknown function (DUF403); Domain of unknown function (DUF407); Domain of unknown function (DUF404). (879 aa)    
Predicted Functional Partners:
AGB23098.1
Hypothetical protein; PFAM: Transglutaminase-like superfamily; Bacterial transglutaminase-like N-terminal region; Putative amidoligase enzyme (DUF2126).
 
  
 0.983
AGB23100.1
Transglutaminase-like enzyme, predicted cysteine protease; PFAM: Transglutaminase-like superfamily; Bacterial transglutaminase-like N-terminal region.
 
  
 0.981
AGB23101.1
PFAM: Uncharacterized protein conserved in bacteria (DUF2248).
 
     0.950
AGB24384.1
Transglutaminase-like enzyme, predicted cysteine protease; PFAM: Transglutaminase-like superfamily; Bacterial transglutaminase-like N-terminal region.
 
  
 0.886
AGB21285.1
Transglutaminase-like enzyme, predicted cysteine protease; PFAM: Transglutaminase-like superfamily.
 
  
 0.880
AGB24643.1
Carboxylate-amine ligase, YbdK family; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
 
   
0.693
AGB24385.1
Hypothetical protein; PFAM: Bacterial domain of unknown function (DUF403).
 
   
0.675
AGB24386.1
Hypothetical protein; PFAM: Domain of unknown function (DUF407); Domain of unknown function (DUF404).
 
   
0.644
AGB23097.1
Hypothetical protein.
       0.536
AGB25661.1
PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain.
       0.489
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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