Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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Score
AGB23157.1Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; PFAM: DJ-1/PfpI family; Bacterial regulatory helix-turn-helix proteins, AraC family. (318 aa)    
Predicted Functional Partners:
AGB23156.1
HD-GYP domain-containing protein; PFAM: HD domain.
 
     0.814
AGB21465.1
Putative ATPase; PFAM: Adenylate and Guanylate cyclase catalytic domain; Bacterial regulatory proteins, luxR family.
  
  
 0.712
AGB21934.1
PFAM: Bacterial regulatory proteins, tetR family.
   
    0.686
AGB26369.1
PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain.
   
    0.677
AGB21416.1
PFAM: Bacterial regulatory proteins, tetR family; TIGRFAM: mycofactocin system transcriptional regulator.
   
  
 0.666
cobB-3
NAD-dependent protein deacetylase, SIR2 family; PFAM: Sir2 family; Belongs to the sirtuin family. Class III subfamily.
  
    0.649
AGB25339.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
   
  
 0.616
AGB20702.1
PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; TIGRFAM: transcriptional regulator, ArgP family.
   
  
 0.613
AGB21483.1
Transcriptional regulator; PFAM: MarR family.
   
  
 0.602
AGB23701.1
PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
   
    0.602
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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