Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB23209.1PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC. (255 aa)    
Predicted Functional Partners:
AGB23207.1
Iron-regulated ABC transporter membrane component SufB; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB.
 0.999
AGB23208.1
Iron-regulated ABC transporter permease protein SufD; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD.
 
 0.999
AGB23211.1
PFAM: NifU-like N terminal domain; TIGRFAM: SUF system FeS assembly protein, NifU family.
 
 
 0.998
AGB23210.1
Cysteine desulfurase-like protein, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 
 0.996
AGB23212.1
Putative metal-sulfur cluster biosynthetic enzyme; PFAM: Domain of unknown function DUF59.
 
  
 0.984
AGB23206.1
Putative transcriptional regulator; PFAM: Bacterial regulatory protein, arsR family.
  
  
 0.949
AGB26321.1
PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase family protein, VC1184 subfamily.
 
 
 0.918
AGB23203.1
PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family.
    
 0.831
egtE
Selenocysteine lyase; Probably catalyzes the conversion of hercynylcysteine sulfoxide to ergothioneine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. EgtE subfamily.
  
 
 0.829
AGB21037.1
Selenocysteine lyase; PFAM: Aminotransferase class-V.
  
 
 0.810
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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