Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB23328.1PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (373 aa)    
Predicted Functional Partners:
AGB23329.1
PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; manually curated.
 
 0.983
AGB23330.1
PFAM: Predicted membrane protein (DUF2339).
 
     0.897
AGB23327.1
Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter.
       0.801
AGB23326.1
PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.
       0.789
AGB23331.1
DNA-binding ferritin-like protein (oxidative damage protectant); PFAM: Ferritin-like domain; Belongs to the Dps family.
 
    0.750
AGB23325.1
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: Bacterial extracellular solute-binding proteins, family 3.
       0.742
AGB24600.1
PFAM: Bacterial regulatory proteins, luxR family.
 
 0.741
AGB23876.1
PFAM: Bacterial regulatory proteins, luxR family.
 
 0.734
AGB21322.1
HD-GYP domain-containing protein; PFAM: HD domain; Bacterial regulatory proteins, luxR family.
 
 0.697
AGB24911.1
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Bacterial regulatory proteins, luxR family.
 
 0.694
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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