Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB23354.1Putative membrane protein; Manually curated. (395 aa)    
Predicted Functional Partners:
AGB23353.1
Putative hydrolase or acyltransferase of alpha/beta superfamily; PFAM: Adenylate and Guanylate cyclase catalytic domain; alpha/beta hydrolase fold.
 
     0.728
AGB23162.1
PFAM: Predicted membrane protein (DUF2207).
  
     0.603
AGB23355.1
Ribosomal protein S1; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1.
       0.516
AGB24951.1
PFAM: Bacterial regulatory proteins, tetR family.
  
     0.485
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
 
     0.476
AGB23792.1
Hypothetical protein.
  
     0.468
AGB20952.1
PFAM: PAP2 superfamily.
  
    0.454
AGB23555.1
Hypothetical protein.
  
     0.446
AGB25059.1
PFAM: Substrate binding domain of ABC-type glycine betaine transport system.
 
     0.440
AGB21537.1
PFAM: Ring hydroxylating beta subunit.
  
     0.438
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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