Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB23386.1Hypothetical protein. (97 aa)    
Predicted Functional Partners:
AGB24461.1
Hypothetical protein.
  
     0.753
AGB26087.1
PFAM: Protein of unknown function (DUF3180).
  
     0.752
AGB20852.1
Hypothetical protein.
  
     0.742
AGB22592.1
PFAM: Protein of unknown function (DUF2581).
  
     0.738
AGB25491.1
PFAM: Chorismate mutase type II; TIGRFAM: monofunctional chorismate mutase, high GC gram positive type.
  
     0.729
AGB23387.1
PFAM: Putative esterase.
       0.727
AGB21852.1
TIGRFAM: TIGR02569 family protein.
  
     0.726
AGB24842.1
Glucitol operon activator.
  
     0.722
AGB24535.1
Hypothetical protein.
  
     0.716
AGB24144.1
Hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.
  
     0.712
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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