STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB23419.1ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter. (254 aa)    
Predicted Functional Partners:
AGB23418.1
PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family; manually curated; non-canonical start codon.
 
 0.999
AGB23417.1
PFAM: Bacterial regulatory proteins, tetR family.
 
  
 0.937
AGB23420.1
PFAM: Methylpurine-DNA glycosylase (MPG); TIGRFAM: DNA-3-methyladenine glycosylase (3mg); Belongs to the DNA glycosylase MPG family.
       0.788
AGB23203.1
PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family.
  
 
 0.730
AGB23342.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter.
   
 
0.726
AGB26458.1
ABC-type multidrug transport system, permease component; PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family; daunorubicin resistance ABC transporter membrane protein.
 
 
 0.715
AGB26043.1
PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family.
 
 
 0.708
AGB20651.1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter.
 
0.698
AGB26042.1
ABC transporter efflux protein, DrrB family; PFAM: ABC-2 type transporter; TIGRFAM: daunorubicin resistance protein C; ABC transporter efflux protein, DrrB family.
 
 
 0.698
AGB23771.1
ABC-type multidrug transport system, permease component; PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family.
 
 
 0.694
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.