Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB23544.1Cation/cationic drug transporter; PFAM: Small Multidrug Resistance protein. (107 aa)    
Predicted Functional Partners:
AGB23545.1
Cation/cationic drug transporter; PFAM: Small Multidrug Resistance protein.
 
    
0.807
AGB23546.1
PFAM: Carboxylesterase; Belongs to the type-B carboxylesterase/lipase family.
       0.565
AGB23547.1
Sterol desaturase; PFAM: Fatty acid hydroxylase superfamily.
       0.487
AGB23550.1
glycine/D-amino acid oxidase, deaminating; PFAM: FAD dependent oxidoreductase.
  
  
 0.452
AGB23549.1
Kef-type K+ transport system, membrane component; PFAM: Sodium/hydrogen exchanger family.
       0.434
AGB20937.1
Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase.
  
 
 0.428
AGB21223.1
Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase.
  
 
 0.428
AGB21231.1
Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase.
  
 
 0.428
AGB24291.1
Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase.
  
 
 0.428
AGB24292.1
Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase.
  
 
 0.428
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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