Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB23602.1Putative protease of the Abi (CAAX) family; PFAM: CAAX amino terminal protease family. (260 aa)    
Predicted Functional Partners:
AGB23603.1
Phosphoketolase; PFAM: XFP N-terminal domain; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; XFP C-terminal domain.
       0.771
AGB25303.1
PFAM: Predicted membrane protein (DUF2319).
 
     0.707
AGB25813.1
PFAM: Predicted membrane protein (DUF2319).
 
     0.704
AGB26086.1
Hypothetical protein.
  
     0.633
AGB23604.1
Putative F420-dependent oxidoreductase, Rv2161c family; PFAM: Luciferase-like monooxygenase; CoA-transferase family III; TIGRFAM: probable F420-dependent oxidoreductase, Rv2161c family; Belongs to the CoA-transferase III family.
 
     0.622
AGB25478.1
Hypothetical protein.
 
    0.619
AGB20597.1
Putative integral membrane protein; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein; manually curated.
 
     0.605
AGB21813.1
Hypothetical protein.
  
     0.589
AGB21596.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter; FHA domain; ABC-2 type transporter.
 
 
 0.559
AGB22423.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter; FHA domain; ABC-2 type transporter.
 
 
 0.542
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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