Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
AGB23616.1PFAM: Protein of unknown function (DUF1810). (148 aa)    
Predicted Functional Partners:
AGB23613.1
Alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase; PFAM: FMN-dependent dehydrogenase.
     
 0.786
AGB23614.1
PFAM: Mechanosensitive ion channel; Cyclic nucleotide-binding domain.
       0.553
AGB23615.1
PFAM: Adenylate and Guanylate cyclase catalytic domain; HAMP domain.
       0.553
AGB25722.1
Phytoene dehydrogenase-like oxidoreductase; PFAM: Thi4 family.
 
   
 0.525
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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