Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB23659.1Plastocyanin. (137 aa)    
Predicted Functional Partners:
AGB20510.1
Hypothetical protein.
 
     0.588
AGB26179.1
Kef-type K+ transport system, membrane component; PFAM: Sodium/hydrogen exchanger family.
 
  
 0.561
AGB26309.1
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase; PFAM: Rieske [2Fe-2S] domain.
 
 0.560
AGB23656.1
PFAM: Glutamine synthetase, catalytic domain.
  
  
 0.555
AGB23658.1
PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain.
       0.551
AGB23655.1
PFAM: Amino acid permease.
       0.502
AGB23657.1
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; PFAM: Luciferase-like monooxygenase.
       0.502
AGB20748.1
glycine/D-amino acid oxidase, deaminating; PFAM: FAD dependent oxidoreductase; Rieske [2Fe-2S] domain.
  
 0.484
AGB24161.1
Rieske Fe-S protein; PFAM: Rieske [2Fe-2S] domain.
  
 0.479
AGB23633.1
Type III secretory pathway, component EscV; PFAM: Nitrile hydratase beta subunit.
     
  0.418
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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