Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
eisPutative acetyltransferase. (409 aa)    
Predicted Functional Partners:
whiB-4
Transcription factor WhiB-like protein; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
   
  
 0.803
AGB25040.1
H+ Antiporter protein; PFAM: Major Facilitator Superfamily; TIGRFAM: H+ Antiporter protein.
  
  
 0.789
AGB26447.1
Nicotinamidase-like amidase; PFAM: Isochorismatase family.
     
 0.706
AGB23426.1
PFAM: S4 domain; FtsJ-like methyltransferase; TIGRFAM: hemolysin TlyA family protein.
     
 0.697
AGB23232.1
Enoyl-(acyl-carrier-protein) reductase (NADH).
      
 0.695
AGB26336.1
PFAM: Mycobacterial cell wall arabinan synthesis protein.
      
 0.695
AGB26335.1
PFAM: Mycobacterial cell wall arabinan synthesis protein.
      
 0.684
AGB24390.1
PFAM: Helix-hairpin-helix motif; SLBB domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; comEA protein.
  
    0.648
rpsL
SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
     
 0.619
AGB24308.1
Hypothetical protein.
  
     0.613
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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