STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB23767.1Transport protein; PFAM: MMPL family; TIGRFAM: X-X-X-Leu-X-X-Gly heptad repeats; Transport protein. (1108 aa)    
Predicted Functional Partners:
AGB26046.1
Polyketide synthase family protein; PFAM: Phosphopantetheine attachment site; Acyl transferase domain; KR domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain.
  
 
 0.688
AGB20668.1
PE-PPE domain-containing protein; PFAM: PE-PPE domain.
  
  
 0.582
AGB20665.1
Putative polyketide synthase component; PFAM: Condensation domain; manually curated.
 
   
 0.579
AGB25210.1
Hypothetical protein.
  
 
   0.535
AGB24945.1
PFAM: ATP synthase I chain.
  
     0.504
AGB23766.1
PFAM: Bacterial regulatory proteins, tetR family.
       0.479
AGB20570.1
PFAM: Protein of unknown function (DUF2786).
  
   
 0.443
AGB23172.1
Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily.
 
 
 0.438
AGB23291.1
PFAM: Domain of unknown function (DUF385); TIGRFAM: deazaflavin-dependent nitroreductase family protein.
  
     0.430
AGB23764.1
Hypothetical protein.
 
   
 0.425
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.