STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB23777.1Putative RND superfamily drug exporter; PFAM: MMPL family. (668 aa)    
Predicted Functional Partners:
AGB23776.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
       0.675
AGB23778.1
PAS domain S-box; PFAM: PAS fold; TIGRFAM: PAS domain S-box.
       0.537
AGB23936.1
Transcriptional regulator; PFAM: MarR family; manually curated.
 
    0.534
AGB22749.1
PFAM: FAD binding domain of DNA photolyase; DNA photolyase.
       0.531
AGB23947.1
Transcriptional regulator; PFAM: MarR family.
 
    0.482
AGB22916.1
ATP-grasp superfamily enzyme; PFAM: PAC2 family.
  
     0.469
AGB20565.1
Transcriptional regulator; PFAM: MarR family.
 
    0.461
AGB21271.1
PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily.
 
 
 0.412
AGB23642.1
Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily.
 
 
 0.410
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.