STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB23793.1PFAM: Protein kinase domain. (662 aa)    
Predicted Functional Partners:
AGB20489.1
PFAM: Protein phosphatase 2C.
 
 
 0.875
AGB25245.1
PFAM: Protein phosphatase 2C.
 
 
 0.841
AGB23568.1
FHA domain-containing protein; PFAM: FHA domain.
 
 
 
 0.659
AGB23794.1
Putative TIM-barrel fold metal-dependent hydrolase; PFAM: Amidohydrolase.
       0.556
AGB20490.1
FHA domain-containing protein; PFAM: FHA domain.
 
 
 
 0.536
AGB25866.1
FHA domain-containing protein; PFAM: FHA domain.
 
 
 
 0.518
AGB25512.1
FHA domain-containing protein; PFAM: FHA domain.
 
 
 
 0.508
AGB20485.1
PFAM: Protein kinase domain; PASTA domain.
 
 
0.504
AGB25800.1
PFAM: Adenylate and Guanylate cyclase catalytic domain.
 
 
 
 0.477
AGB21358.1
Capsular exopolysaccharide biosynthesis protein; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family.
   
 
 0.459
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.