Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB24251.1Hypothetical protein; PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase. (266 aa)    
Predicted Functional Partners:
AGB24250.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
       0.709
AGB24249.1
Penicillin-binding protein, beta-lactamase class C; PFAM: Beta-lactamase.
       0.664
AGB24252.1
Mycothiol-dependent formaldehyde dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: mycothiol-dependent formaldehyde dehydrogenase.
       0.566
AGB20499.1
Pirin-related protein; PFAM: Pirin C-terminal cupin domain; Pirin; Belongs to the pirin family.
 
  
 0.547
AGB20506.1
Pirin-related protein; PFAM: Pirin C-terminal cupin domain; Pirin; Belongs to the pirin family.
 
  
 0.543
AGB25343.1
Flavodoxin reductase family protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; MOSC domain; Oxidoreductase NAD-binding domain; 3-alpha domain.
    
 0.528
AGB20564.1
Pirin-related protein; PFAM: Pirin; Belongs to the pirin family.
 
  
 0.517
AGB21714.1
Flavodoxin reductase family protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain.
     
 0.511
AGB21816.1
Flavodoxin reductase family protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain.
     
 0.511
AGB21886.1
2-polyprenylphenol hydroxylase-like oxidoreductase; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain.
     
 0.511
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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