Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB24317.1Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily. (403 aa)    
Predicted Functional Partners:
AGB24316.1
Transcriptional regulator; PFAM: MarR family.
 
   
 0.845
AGB21519.1
Hypothetical protein.
  
 0.584
AGB24314.1
ABC-type cobalt transport system, permease component CbiQ; PFAM: Cobalt transport protein.
  
  
 0.569
AGB22391.1
Transcriptional regulator; PFAM: MarR family.
 
   
 0.565
AGB24315.1
ATPase component of various ABC-type transport systems with duplicated ATPase domain; PFAM: ABC transporter; Predicted membrane protein (DUF2232).
  
  
 0.552
AGB24859.1
PFAM: Carbohydrate phosphorylase; Protein of unknown function (DUF3417); TIGRFAM: alpha-glucan phosphorylases.
 
  
 0.535
AGB21155.1
Putative transcriptional regulator; PFAM: Bacterial regulatory protein, arsR family.
  
  
 0.468
AGB21271.1
PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily.
   
  
 0.446
AGB23642.1
Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily.
   
  
 0.446
AGB26625.1
Transcriptional regulator; PFAM: MarR family.
 
   
 0.433
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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