Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB24323.1Ketosteroid isomerase-like protein. (129 aa)    
Predicted Functional Partners:
AGB24322.1
Hypothetical protein.
       0.584
AGB26106.1
PFAM: RyR domain.
  
     0.578
AGB25269.1
ATP-dependent transcriptional regulator; PFAM: Bacterial regulatory proteins, luxR family.
 
     0.574
AGB23808.1
PFAM: Phosphoesterase family.
  
     0.560
AGB21361.1
PFAM: Archaeal ATPase; Bacterial regulatory proteins, luxR family.
 
   
 0.558
AGB26312.1
PFAM: Bacterial regulatory proteins, luxR family.
  
    0.550
AGB21674.1
Hypothetical protein; TIGRFAM: DNA binding domain, excisionase family.
  
     0.544
AGB24841.1
PFAM: Bacterial regulatory proteins, luxR family.
 
    0.543
AGB25707.1
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Bacterial regulatory proteins, luxR family.
 
    0.503
AGB23887.1
Hypothetical protein.
 
    0.487
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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