Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB24330.1Hypothetical protein. (572 aa)    
Predicted Functional Partners:
AGB22423.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter; FHA domain; ABC-2 type transporter.
 
 
 0.544
AGB25243.1
FHA domain-containing protein; PFAM: FHA domain.
 
 
 
 0.524
AGB21596.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter; FHA domain; ABC-2 type transporter.
 
 
 0.520
AGB20489.1
PFAM: Protein phosphatase 2C.
  
 
 0.507
AGB25245.1
PFAM: Protein phosphatase 2C.
  
 
 0.507
AGB24276.1
Hypothetical protein.
 
   
 0.500
AGB26493.1
PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Stage II sporulation protein E (SpoIIE); Phosphoserine phosphatase RsbU, N-terminal domain; PAS fold; TIGRFAM: PAS domain S-box.
  
 
 0.484
AGB23508.1
Hypothetical protein.
 
     0.470
AGB23456.1
Hypothetical protein.
 
  
 0.459
AGB24329.1
Hypothetical protein.
       0.435
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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