Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB24377.1Uncharacterized protein, putative amidase; PFAM: Creatinine amidohydrolase. (249 aa)    
Predicted Functional Partners:
AGB22976.1
Uncharacterized protein, putative amidase; PFAM: Creatinine amidohydrolase.
  
  
 
0.928
AGB24979.1
Uncharacterized protein, putative amidase; PFAM: Creatinine amidohydrolase.
  
  
 
0.910
AGB24521.1
PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; manually curated.
    
  0.902
AGB24378.1
PFAM: Glutamine synthetase, catalytic domain; TIGRFAM: glutamine synthetase, type III.
 
   
 0.825
AGB24376.1
PFAM: Bacterial regulatory proteins, tetR family.
       0.773
AGB24379.1
Ring-hydroxylating dioxygenase, large terminal subunit; PFAM: Rieske [2Fe-2S] domain.
       0.773
AGB21422.1
PFAM: Glycosyl transferase family 2; TIGRFAM: mycofactocin system glycosyltransferase.
 
  
 0.710
AGB21419.1
PFAM: Radical SAM superfamily; TIGRFAM: radical SAM peptide maturase, mycofactocin system; radical SAM additional 4Fe4S-binding domain.
 
 
 0.582
AGB21418.1
TIGRFAM: mycofactocin system RPExFGAL protein.
 
 
 0.580
rnz
Metal-dependent hydrolase, beta-lactamase superfamily III; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA.
       0.511
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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