Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB24452.1Nicotinamidase-like amidase; PFAM: Isochorismatase family. (179 aa)    
Predicted Functional Partners:
AGB22795.1
PFAM: Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; FAD dependent oxidoreductase; TIGRFAM: sarcosine oxidase, gamma subunit family, heterotetrameric form; Belongs to the GcvT family.
  
 0.732
AGB24029.1
PFAM: Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; FAD dependent oxidoreductase; Belongs to the GcvT family.
  
 0.732
cobB-2
NAD-dependent protein deacetylase, SIR2 family; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
 
 
 0.715
nadE
NAD synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
 0.711
AGB23515.1
Nicotinamidase-like amidase; PFAM: Isochorismatase family.
  
     0.707
AGB21840.1
PFAM: chorismate binding enzyme; TIGRFAM: isochorismate synthases.
    
 0.688
AGB24453.1
Molecular chaperone (small heat shock protein); PFAM: Hsp20/alpha crystallin family; Belongs to the small heat shock protein (HSP20) family.
  
  
 0.638
AGB24034.1
PFAM: Pyridine nucleotide-disulphide oxidoreductase; Glycine cleavage T-protein C-terminal barrel domain; Aminomethyltransferase folate-binding domain; TIGRFAM: sarcosine oxidase, alpha subunit family, heterotetrameric form.
  
 
 0.630
AGB20748.1
glycine/D-amino acid oxidase, deaminating; PFAM: FAD dependent oxidoreductase; Rieske [2Fe-2S] domain.
 
  0.600
AGB23303.1
Putative hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold.
 
 0.565
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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