STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB24481.1Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase. (540 aa)    
Predicted Functional Partners:
AGB24483.1
Hypothetical protein.
   
 0.986
AGB21551.1
Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase.
  
  
 
0.949
AGB23708.1
PFAM: Cytochrome P450.
    
 0.934
AGB25255.1
Nucleoside-diphosphate-sugar epimerase; PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase family.
    
 0.934
AGB25844.1
PFAM: Cytochrome P450.
    
 0.934
AGB25925.1
PFAM: Cytochrome P450.
    
 0.934
AGB25979.1
PFAM: Cytochrome P450.
    
 0.934
AGB24482.1
Hypothetical protein.
 
     0.930
AGB26107.1
WD40 repeat-containing protein; PFAM: WD domain, G-beta repeat.
 
 
 0.778
AGB24160.1
Cytochrome c, mono- and diheme variants family; PFAM: Cytochrome c.
  
 0.764
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.