Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB24529.1Hypothetical protein. (113 aa)    
Predicted Functional Partners:
AGB24530.1
PFAM: Domain of unknown function (DUF477).
  
    0.585
AGB26613.1
Hypothetical protein.
  
     0.560
AGB24531.1
Hypothetical protein.
       0.559
AGB24639.1
Hypothetical protein.
  
     0.533
AGB24054.1
Hypothetical protein; PFAM: Activator of Hsp90 ATPase homolog 1-like protein.
  
   
 0.529
AGB24547.1
Phage terminase-like protein, large subunit; PFAM: Phage Terminase.
  
  
 0.498
AGB22137.1
Hypothetical protein.
 
 
 
 0.468
rsfS
Iojap-like ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
  
  
 0.452
AGB24532.1
PFAM: HNH endonuclease.
       0.433
AGB26246.1
Hypothetical protein.
  
  
 0.432
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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