Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB24600.1PFAM: Bacterial regulatory proteins, luxR family. (936 aa)    
Predicted Functional Partners:
AGB24438.1
Serine phosphatase RsbU, regulator of sigma subunit; PFAM: GAF domain; Stage II sporulation protein E (SpoIIE).
 
 0.903
AGB24599.1
Histidine kinase,GAF domain-containing protein; PFAM: Histidine kinase; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 0.808
AGB26493.1
PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Stage II sporulation protein E (SpoIIE); Phosphoserine phosphatase RsbU, N-terminal domain; PAS fold; TIGRFAM: PAS domain S-box.
 
 0.806
AGB23496.1
Putative secreted hydrolase; PFAM: Hydroxyneurosporene synthase (CrtC).
 
     0.780
AGB26213.1
Lactoylglutathione lyase-like lyase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
 
   
 0.779
AGB21073.1
Transcriptional regulator; PFAM: IclR helix-turn-helix domain.
  
  
 0.761
AGB23492.1
Acyl dehydratase.
 
   
 0.756
AGB25163.1
PFAM: Protein of unknown function (DUF1214).
  
     0.753
AGB23328.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 0.741
AGB23769.1
Hypothetical protein.
  
   
 0.738
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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