Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB24663.1ABC-type spermidine/putrescine transport system, permease component I; PFAM: Binding-protein-dependent transport system inner membrane component. (293 aa)    
Predicted Functional Partners:
AGB24661.1
ABC-type spermidine/putrescine transport system, ATPase component; PFAM: ABC transporter; TOBE domain.
 
 0.999
AGB24662.1
Spermidine/putrescine-binding periplasmic protein; PFAM: Bacterial extracellular solute-binding protein.
 
 
 0.998
AGB24664.1
ABC-type spermidine/putrescine transport system, permease component II; PFAM: Binding-protein-dependent transport system inner membrane component.
0.998
AGB26469.1
ABC-type spermidine/putrescine transport system, ATPase component; PFAM: ABC transporter; TOBE domain.
 
 0.990
AGB26470.1
ABC-type spermidine/putrescine transport system, permease component II; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.987
AGB20889.1
Spermidine/putrescine-binding periplasmic protein; PFAM: Bacterial extracellular solute-binding protein.
 
 
 0.955
AGB23823.1
Spermidine/putrescine-binding periplasmic protein; PFAM: Bacterial extracellular solute-binding protein.
 
 
 0.954
AGB26472.1
ABC-type Fe3+ transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein.
    
  0.940
AGB23825.1
ABC-type spermidine/putrescine transport system, permease component II; PFAM: Binding-protein-dependent transport system inner membrane component.
0.927
AGB26471.1
ABC-type uncharacterized transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
  
  
  0.917
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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