STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB24769.1Hypothetical protein; PFAM: Carboxymuconolactone decarboxylase family. (179 aa)    
Predicted Functional Partners:
AGB25850.1
Uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein; PFAM: Carboxymuconolactone decarboxylase family.
    
 0.944
AGB21555.1
Uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein; PFAM: Carboxymuconolactone decarboxylase family.
    
 0.939
AGB26121.1
Uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein; PFAM: Carboxymuconolactone decarboxylase family.
    
 0.939
AGB22345.1
PFAM: alpha/beta hydrolase fold; TIGRFAM: 3-oxoadipate enol-lactonase.
  
 
 0.936
AGB24756.1
PFAM: Carboxymuconolactone decarboxylase family.
  
  
 
0.914
AGB22342.1
PFAM: Muconolactone delta-isomerase; TIGRFAM: muconolactone delta-isomerase.
     
  0.900
AGB24770.1
Rieske (2Fe-2S) domain-containing protein; PFAM: Rieske [2Fe-2S] domain.
 
     0.820
AGB24774.1
PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.
 
    0.813
AGB24775.1
PFAM: Acyl-CoA dehydrogenase, C-terminal domain.
  
    0.790
AGB24771.1
Hypothetical protein.
       0.789
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.