Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGB24791.1 | AGB24792.1 | Mycsm_04557 | Mycsm_04558 | Putative TIM-barrel fold metal-dependent hydrolase; PFAM: Amidohydrolase. | PFAM: Cytochrome P450. | 0.884 |
AGB24791.1 | AGB24793.1 | Mycsm_04557 | Mycsm_04559 | Putative TIM-barrel fold metal-dependent hydrolase; PFAM: Amidohydrolase. | Ferredoxin; PFAM: Protein of unknown function (DUF1271). | 0.902 |
AGB24791.1 | AGB24794.1 | Mycsm_04557 | Mycsm_04560 | Putative TIM-barrel fold metal-dependent hydrolase; PFAM: Amidohydrolase. | PFAM: Bacterial regulatory proteins, tetR family. | 0.898 |
AGB24791.1 | AGB24795.1 | Mycsm_04557 | Mycsm_04561 | Putative TIM-barrel fold metal-dependent hydrolase; PFAM: Amidohydrolase. | Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short chain dehydrogenase. | 0.871 |
AGB24792.1 | AGB24791.1 | Mycsm_04558 | Mycsm_04557 | PFAM: Cytochrome P450. | Putative TIM-barrel fold metal-dependent hydrolase; PFAM: Amidohydrolase. | 0.884 |
AGB24792.1 | AGB24793.1 | Mycsm_04558 | Mycsm_04559 | PFAM: Cytochrome P450. | Ferredoxin; PFAM: Protein of unknown function (DUF1271). | 0.939 |
AGB24792.1 | AGB24794.1 | Mycsm_04558 | Mycsm_04560 | PFAM: Cytochrome P450. | PFAM: Bacterial regulatory proteins, tetR family. | 0.898 |
AGB24792.1 | AGB24795.1 | Mycsm_04558 | Mycsm_04561 | PFAM: Cytochrome P450. | Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short chain dehydrogenase. | 0.913 |
AGB24792.1 | AGB25697.1 | Mycsm_04558 | Mycsm_05508 | PFAM: Cytochrome P450. | Amino acid adenylation enzyme/thioester reductase family protein; PFAM: Phosphopantetheine attachment site; Thioesterase domain; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain. | 0.950 |
AGB24792.1 | AGB25698.1 | Mycsm_04558 | Mycsm_05509 | PFAM: Cytochrome P450. | Polyketide synthase family protein; PFAM: Phosphopantetheine attachment site; Acyl transferase domain; KR domain; Alcohol dehydrogenase GroES-like domain; Beta-ketoacyl synthase, N-terminal domain; Condensation domain; Beta-ketoacyl synthase, C-terminal domain; Zinc-binding dehydrogenase. | 0.957 |
AGB24792.1 | AGB25961.1 | Mycsm_04558 | Mycsm_05789 | PFAM: Cytochrome P450. | Phosphopantetheine-containing protein; PFAM: Phosphopantetheine attachment site. | 0.920 |
AGB24792.1 | AGB26046.1 | Mycsm_04558 | Mycsm_05876 | PFAM: Cytochrome P450. | Polyketide synthase family protein; PFAM: Phosphopantetheine attachment site; Acyl transferase domain; KR domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain. | 0.881 |
AGB24792.1 | AGB26047.1 | Mycsm_04558 | Mycsm_05877 | PFAM: Cytochrome P450. | Polyketide synthase family protein; PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain. | 0.881 |
AGB24792.1 | AGB26048.1 | Mycsm_04558 | Mycsm_05878 | PFAM: Cytochrome P450. | Polyketide synthase family protein; PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain. | 0.881 |
AGB24793.1 | AGB24791.1 | Mycsm_04559 | Mycsm_04557 | Ferredoxin; PFAM: Protein of unknown function (DUF1271). | Putative TIM-barrel fold metal-dependent hydrolase; PFAM: Amidohydrolase. | 0.902 |
AGB24793.1 | AGB24792.1 | Mycsm_04559 | Mycsm_04558 | Ferredoxin; PFAM: Protein of unknown function (DUF1271). | PFAM: Cytochrome P450. | 0.939 |
AGB24793.1 | AGB24794.1 | Mycsm_04559 | Mycsm_04560 | Ferredoxin; PFAM: Protein of unknown function (DUF1271). | PFAM: Bacterial regulatory proteins, tetR family. | 0.942 |
AGB24793.1 | AGB24795.1 | Mycsm_04559 | Mycsm_04561 | Ferredoxin; PFAM: Protein of unknown function (DUF1271). | Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short chain dehydrogenase. | 0.829 |
AGB24794.1 | AGB24791.1 | Mycsm_04560 | Mycsm_04557 | PFAM: Bacterial regulatory proteins, tetR family. | Putative TIM-barrel fold metal-dependent hydrolase; PFAM: Amidohydrolase. | 0.898 |
AGB24794.1 | AGB24792.1 | Mycsm_04560 | Mycsm_04558 | PFAM: Bacterial regulatory proteins, tetR family. | PFAM: Cytochrome P450. | 0.898 |
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