Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AGB24801.1Succinate dehydrogenase/fumarate reductase flavoprotein subunit; PFAM: FAD binding domain. (581 aa)    
Predicted Functional Partners:
AGB25974.1
acetyl-CoA acetyltransferase.
 
 0.979
AGB25935.1
Rieske (2Fe-2S) domain-containing protein; PFAM: Rieske [2Fe-2S] domain.
 
  
 0.976
AGB26012.1
Flavodoxin reductase family protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain.
  
 
 0.963
AGB25283.1
NTF2 domain-containing protein; PFAM: Nuclear transport factor 2 (NTF2) domain.
 
  
 0.950
AGB24427.1
Rieske (2Fe-2S) domain-containing protein; PFAM: Rieske [2Fe-2S] domain.
 
  
 0.929
AGB25862.1
NTF2 domain-containing protein; PFAM: Nuclear transport factor 2 (NTF2) domain.
  
  
  0.920
AGB25932.1
Ketosteroid isomerase-like protein; PFAM: Nuclear transport factor 2 (NTF2) domain.
 
  
  0.920
AGB25056.1
2-oxoglutarate dehydrogenase E1 component; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); Dehydrogenase E1 component; Transketolase, pyrimidine binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component.
  
 0.884
AGB24799.1
Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short chain dehydrogenase.
    
 0.877
AGB24798.1
Putative metal-dependent hydrolase; PFAM: Putative cyclase.
 
     0.876
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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