Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB24833.1Sugar phosphate permease; PFAM: Sugar (and other) transporter; TIGRFAM: metabolite-proton symporter. (444 aa)    
Predicted Functional Partners:
AGB24834.1
PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein.
     
 0.662
AGB24832.1
PFAM: Adenylate and Guanylate cyclase catalytic domain; HAMP domain.
       0.645
AGB24830.1
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: AMP-binding enzyme.
     
 0.633
AGB24829.1
Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short chain dehydrogenase.
     
 0.629
AGB24831.1
Hypothetical protein.
       0.624
AGB21519.1
Hypothetical protein.
  
 0.584
AGB24828.1
PFAM: Methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain.
     
 0.433
pheA
PFAM: Prephenate dehydratase; ACT domain.
  
 
 0.403
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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