STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB25035.1Hypothetical protein; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. (157 aa)    
Predicted Functional Partners:
AGB25037.1
PFAM: Domain of unknown function (DUF385); TIGRFAM: deazaflavin-dependent nitroreductase family protein.
    
  0.816
AGB25036.1
HIT family hydrolase, diadenosine tetraphosphate hydrolase; PFAM: HIT domain.
       0.771
AGB25032.1
DNA-binding domain-containing protein, AraC-type.
 
    0.753
AGB21465.1
Putative ATPase; PFAM: Adenylate and Guanylate cyclase catalytic domain; Bacterial regulatory proteins, luxR family.
   
    0.690
AGB21121.1
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; PFAM: DJ-1/PfpI family; Bacterial regulatory helix-turn-helix proteins, AraC family.
  
    0.682
AGB22508.1
Putative transcriptional regulator; PFAM: HxlR-like helix-turn-helix.
  
    0.674
AGB23701.1
PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
   
    0.664
AGB25339.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
   
    0.662
AGB25034.1
Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily.
       0.623
AGB26182.1
Lignostilbene-alpha,beta-dioxygenase-like enzyme; PFAM: Retinal pigment epithelial membrane protein.
      
 0.594
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.