Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB25242.1Hypothetical protein; Manually curated. (363 aa)    
Predicted Functional Partners:
AGB20980.1
Hypothetical protein.
  
     0.770
AGB21127.1
Hypothetical protein.
  
     0.770
AGB21844.1
Hypothetical protein.
  
     0.769
AGB25446.1
Hypothetical protein.
  
     0.769
AGB20838.1
Hypothetical protein.
  
     0.768
AGB26362.1
Hypothetical protein.
  
     0.765
AGB21193.1
Hypothetical protein.
  
     0.764
AGB21525.1
Hypothetical protein.
  
     0.764
AGB26639.1
Hypothetical protein.
  
     0.764
AGB25252.1
Hypothetical protein.
  
     0.761
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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