STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB25323.1Putative peptidoglycan-binding domain-containing protein; PFAM: PE-PPE domain; Putative peptidoglycan binding domain. (338 aa)    
Predicted Functional Partners:
AGB25322.1
PFAM: Protein of unknown function (DUF1232).
       0.735
AGB23679.1
Chorismate mutase, putative; Catalyzes the Claisen rearrangement of chorismate to prephenate.
   
    0.591
AGB23709.1
Hypothetical protein.
 
  
 0.492
AGB25324.1
Hypothetical protein.
       0.486
AGB20648.1
PFAM: Glycosyl hydrolase family 3 N terminal domain; manually curated.
  
 
 0.437
AGB20664.1
Polyketide synthase family protein; PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; Alcohol dehydrogenase GroES-like domain; Beta-ketoacyl synthase, N-terminal domain; Zinc-binding dehydrogenase; Beta-ketoacyl synthase, C-terminal domain.
 
 
  0.434
AGB23344.1
PFAM: Integral membrane protein (intg_mem_TP0381); TIGRFAM: conserved hypothetical integral membrane protein TIGR02206.
  
    0.427
AGB23225.1
Cell wall-associated hydrolase, invasion-associated protein; PFAM: NlpC/P60 family.
  
  
 0.421
AGB25325.1
PFAM: Putative esterase.
  
    0.419
lpqB
Sporulation/spore germination protein; PFAM: Lipoprotein LpqB beta-propeller domain; Sporulation and spore germination.
     
 0.411
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.