Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AGB25461.1PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. (491 aa)    
Predicted Functional Partners:
AGB25462.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 0.999
AGB25621.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 0.897
AGB20593.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; manually curated.
 
 0.886
AGB20997.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 0.869
AGB24992.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 0.867
AGB21088.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 0.862
AGB21804.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 0.841
AGB23531.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 0.841
AGB26577.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 0.839
AGB25872.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; manually curated.
 
 0.837
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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