STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB25744.1PFAM: Gas vesicle protein K. (95 aa)    
Predicted Functional Partners:
AGB25747.1
Gas vesicle protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth.
 
   
 0.964
AGB25745.1
PFAM: Gas vesicle protein.
 
   
 0.963
AGB25748.1
PFAM: Gas vesicle synthesis protein GvpO; manually curated.
 
   
 0.963
AGB25746.1
PFAM: Gas vesicle synthesis protein GvpL/GvpF.
 
   
 0.960
gvpA
Gas vesicle protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure.
 
   
 0.951
AGB25749.1
PFAM: Gas vesicle protein G.
 
   
 0.950
AGB25750.1
PFAM: Gas vesicle synthesis protein GvpL/GvpF.
 
   
 0.950
AGB25752.1
PFAM: Polyketide cyclase / dehydrase and lipid transport.
 
     0.927
AGB25753.1
Hypothetical protein.
 
     0.924
AGB25743.1
Putative esterase of the alpha-beta hydrolase superfamily; PFAM: Patatin-like phospholipase.
       0.768
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.