STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB25931.1PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv2161c family. (292 aa)    
Predicted Functional Partners:
AGB25929.1
acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain.
 
   
 0.940
AGB25928.1
Putative nucleic-acid-binding protein containing a Zn-ribbon; PFAM: DUF35 OB-fold domain.
 
   
 0.936
AGB25932.1
Ketosteroid isomerase-like protein; PFAM: Nuclear transport factor 2 (NTF2) domain.
 
     0.926
AGB25930.1
acetyl-CoA acetyltransferase; PFAM: Glycoprotease family.
 
     0.879
AGB25927.1
PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv3520c family.
 
     0.872
AGB25975.1
MaoC-like protein; PFAM: MaoC like domain.
 
    0.668
AGB24797.1
Putative flavoprotein; PFAM: NADPH-dependent FMN reductase.
 
 0.654
AGB22218.1
Putative flavoprotein; PFAM: NADPH-dependent FMN reductase.
 
 0.652
AGB25976.1
Putative nucleic-acid-binding protein containing a Zn-ribbon; PFAM: DUF35 OB-fold domain.
 
     0.637
AGB23942.1
Putative flavoprotein; PFAM: NADPH-dependent FMN reductase.
  
 0.627
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.