Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGB20747.1 | AGB22004.1 | Mycsm_00292 | Mycsm_01603 | Hypothetical protein. | Hypothetical protein. | 0.767 |
AGB20747.1 | AGB25161.1 | Mycsm_00292 | Mycsm_04946 | Hypothetical protein. | Hypothetical protein. | 0.762 |
AGB20747.1 | AGB25697.1 | Mycsm_00292 | Mycsm_05508 | Hypothetical protein. | Amino acid adenylation enzyme/thioester reductase family protein; PFAM: Phosphopantetheine attachment site; Thioesterase domain; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain. | 0.415 |
AGB20747.1 | AGB25698.1 | Mycsm_00292 | Mycsm_05509 | Hypothetical protein. | Polyketide synthase family protein; PFAM: Phosphopantetheine attachment site; Acyl transferase domain; KR domain; Alcohol dehydrogenase GroES-like domain; Beta-ketoacyl synthase, N-terminal domain; Condensation domain; Beta-ketoacyl synthase, C-terminal domain; Zinc-binding dehydrogenase. | 0.415 |
AGB20747.1 | AGB25811.1 | Mycsm_00292 | Mycsm_05633 | Hypothetical protein. | Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short chain dehydrogenase. | 0.484 |
AGB20747.1 | AGB25913.1 | Mycsm_00292 | Mycsm_05739 | Hypothetical protein. | Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.561 |
AGB20747.1 | AGB25937.1 | Mycsm_00292 | Mycsm_05763 | Hypothetical protein. | Sulfotransferase family protein; PFAM: Sulfotransferase domain. | 0.800 |
AGB20747.1 | AGB25938.1 | Mycsm_00292 | Mycsm_05764 | Hypothetical protein. | Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short chain dehydrogenase. | 0.726 |
AGB20747.1 | AGB25939.1 | Mycsm_00292 | Mycsm_05765 | Hypothetical protein. | Hypothetical protein. | 0.768 |
AGB22004.1 | AGB20747.1 | Mycsm_01603 | Mycsm_00292 | Hypothetical protein. | Hypothetical protein. | 0.767 |
AGB22004.1 | AGB25938.1 | Mycsm_01603 | Mycsm_05764 | Hypothetical protein. | Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short chain dehydrogenase. | 0.829 |
AGB22004.1 | AGB25939.1 | Mycsm_01603 | Mycsm_05765 | Hypothetical protein. | Hypothetical protein. | 0.793 |
AGB24659.1 | AGB25697.1 | Mycsm_04419 | Mycsm_05508 | 3-oxoacyl-(acyl-carrier protein) reductase; PFAM: MaoC like domain; Acyl transferase domain; Domain of unknown function (DUF1729); Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain. | Amino acid adenylation enzyme/thioester reductase family protein; PFAM: Phosphopantetheine attachment site; Thioesterase domain; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain. | 0.975 |
AGB24659.1 | AGB25698.1 | Mycsm_04419 | Mycsm_05509 | 3-oxoacyl-(acyl-carrier protein) reductase; PFAM: MaoC like domain; Acyl transferase domain; Domain of unknown function (DUF1729); Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain. | Polyketide synthase family protein; PFAM: Phosphopantetheine attachment site; Acyl transferase domain; KR domain; Alcohol dehydrogenase GroES-like domain; Beta-ketoacyl synthase, N-terminal domain; Condensation domain; Beta-ketoacyl synthase, C-terminal domain; Zinc-binding dehydrogenase. | 0.975 |
AGB24659.1 | AGB25811.1 | Mycsm_04419 | Mycsm_05633 | 3-oxoacyl-(acyl-carrier protein) reductase; PFAM: MaoC like domain; Acyl transferase domain; Domain of unknown function (DUF1729); Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain. | Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short chain dehydrogenase. | 0.820 |
AGB24659.1 | AGB25913.1 | Mycsm_04419 | Mycsm_05739 | 3-oxoacyl-(acyl-carrier protein) reductase; PFAM: MaoC like domain; Acyl transferase domain; Domain of unknown function (DUF1729); Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain. | Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.820 |
AGB24659.1 | AGB25938.1 | Mycsm_04419 | Mycsm_05764 | 3-oxoacyl-(acyl-carrier protein) reductase; PFAM: MaoC like domain; Acyl transferase domain; Domain of unknown function (DUF1729); Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain. | Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short chain dehydrogenase. | 0.820 |
AGB25161.1 | AGB20747.1 | Mycsm_04946 | Mycsm_00292 | Hypothetical protein. | Hypothetical protein. | 0.762 |
AGB25161.1 | AGB25938.1 | Mycsm_04946 | Mycsm_05764 | Hypothetical protein. | Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short chain dehydrogenase. | 0.792 |
AGB25161.1 | AGB25939.1 | Mycsm_04946 | Mycsm_05765 | Hypothetical protein. | Hypothetical protein. | 0.769 |
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