Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGB26271.1 | AGB26272.1 | Mycsm_06112 | Mycsm_06113 | Putative transcriptional regulator; PFAM: Helix-turn-helix. | Hypothetical protein. | 0.545 |
AGB26271.1 | AGB26273.1 | Mycsm_06112 | Mycsm_06114 | Putative transcriptional regulator; PFAM: Helix-turn-helix. | PFAM: Protein of unknown function (DUF732). | 0.545 |
AGB26271.1 | AGB26274.1 | Mycsm_06112 | Mycsm_06115 | Putative transcriptional regulator; PFAM: Helix-turn-helix. | PFAM: Protein of unknown function (DUF732). | 0.545 |
AGB26271.1 | AGB26275.1 | Mycsm_06112 | Mycsm_06116 | Putative transcriptional regulator; PFAM: Helix-turn-helix. | TIGRFAM: DNA binding domain, excisionase family. | 0.484 |
AGB26271.1 | AGB26276.1 | Mycsm_06112 | Mycsm_06117 | Putative transcriptional regulator; PFAM: Helix-turn-helix. | Hypothetical protein. | 0.484 |
AGB26271.1 | AGB26277.1 | Mycsm_06112 | Mycsm_06118 | Putative transcriptional regulator; PFAM: Helix-turn-helix. | TIGRFAM: DNA binding domain, excisionase family. | 0.484 |
AGB26271.1 | AGB26278.1 | Mycsm_06112 | Mycsm_06119 | Putative transcriptional regulator; PFAM: Helix-turn-helix. | Hypothetical protein. | 0.454 |
AGB26271.1 | AGB26279.1 | Mycsm_06112 | Mycsm_06120 | Putative transcriptional regulator; PFAM: Helix-turn-helix. | Hypothetical protein; TIGRFAM: DNA binding domain, excisionase family. | 0.454 |
AGB26272.1 | AGB26271.1 | Mycsm_06113 | Mycsm_06112 | Hypothetical protein. | Putative transcriptional regulator; PFAM: Helix-turn-helix. | 0.545 |
AGB26272.1 | AGB26273.1 | Mycsm_06113 | Mycsm_06114 | Hypothetical protein. | PFAM: Protein of unknown function (DUF732). | 0.773 |
AGB26272.1 | AGB26274.1 | Mycsm_06113 | Mycsm_06115 | Hypothetical protein. | PFAM: Protein of unknown function (DUF732). | 0.773 |
AGB26272.1 | AGB26275.1 | Mycsm_06113 | Mycsm_06116 | Hypothetical protein. | TIGRFAM: DNA binding domain, excisionase family. | 0.678 |
AGB26272.1 | AGB26276.1 | Mycsm_06113 | Mycsm_06117 | Hypothetical protein. | Hypothetical protein. | 0.678 |
AGB26272.1 | AGB26277.1 | Mycsm_06113 | Mycsm_06118 | Hypothetical protein. | TIGRFAM: DNA binding domain, excisionase family. | 0.678 |
AGB26272.1 | AGB26278.1 | Mycsm_06113 | Mycsm_06119 | Hypothetical protein. | Hypothetical protein. | 0.631 |
AGB26272.1 | AGB26279.1 | Mycsm_06113 | Mycsm_06120 | Hypothetical protein. | Hypothetical protein; TIGRFAM: DNA binding domain, excisionase family. | 0.631 |
AGB26273.1 | AGB26271.1 | Mycsm_06114 | Mycsm_06112 | PFAM: Protein of unknown function (DUF732). | Putative transcriptional regulator; PFAM: Helix-turn-helix. | 0.545 |
AGB26273.1 | AGB26272.1 | Mycsm_06114 | Mycsm_06113 | PFAM: Protein of unknown function (DUF732). | Hypothetical protein. | 0.773 |
AGB26273.1 | AGB26274.1 | Mycsm_06114 | Mycsm_06115 | PFAM: Protein of unknown function (DUF732). | PFAM: Protein of unknown function (DUF732). | 0.773 |
AGB26273.1 | AGB26275.1 | Mycsm_06114 | Mycsm_06116 | PFAM: Protein of unknown function (DUF732). | TIGRFAM: DNA binding domain, excisionase family. | 0.678 |
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