STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB26459.1PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase. (642 aa)    
Predicted Functional Partners:
AGB25864.1
PFAM: GtrA-like protein; Glycosyl transferase family 2.
 
  
 0.845
AGB24989.1
PFAM: GtrA-like protein; Glycosyl transferase family 2.
 
  
 0.839
AGB26460.1
Putative membrane protein; PFAM: Protein of unknown function, DUF417.
       0.723
AGB26461.1
Monoamine oxidase; PFAM: Flavin containing amine oxidoreductase.
     
 0.693
AGB20937.1
Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase.
  
 
 0.598
AGB21223.1
Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase.
  
 
 0.598
AGB21231.1
Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase.
  
 
 0.598
AGB24291.1
Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase.
  
 
 0.598
AGB24292.1
Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase.
  
 
 0.598
AGB25272.1
Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase.
  
 
 0.598
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.